$59 Find Cheap Flights from Jacksonville to Puerto Rico

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight from Jacksonville to Puerto Rico departing on 2/24. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
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Best Puerto Rico Flight Deals from Jacksonville

Cheapest round-trip prices found by our users on KAYAK in the last 72 hours

Aguadilla
Aguadilla1 stop$541

Good to know

Low season

September

High season

June

Cheapest flight

$59
Best time to beat the crowds but there is an average 6% increase in price.
Most popular time to fly and prices are also 4% lower on average.
Flight from Jacksonville to San Juan

FAQs - booking Puerto Rico flights

  • Where can one find a prayer room at JAX?

    A meditation room is available between ticketing and the pre-security courtyard. Here you can have a prayer session before departing from the airport. Everyone can use the room regardless of their religion. This helps you socialize with people from different religious backgrounds.

  • Where can one grab a meal at JAX?

    The DoubleTree hotel is available within the airport and it has a restaurant. You can walk or take a free shuttle. Here, you can get varied types of delicacies. They are affordable to all guests regardless of the flight you have booked. You can also have a drink before departing.

  • Are there shops are SJU?

    Yes. Shops and stores are available at the airport. They are located at the main terminal. Some shops and stores include Casa, Enrique Tomas, and Dufry Shops. You can stop by to buy some things you might need during your stay at the airport.

  • Does BQN offer facilities to the disabled?

    Yes. The airport offers special assistance to travelers with physical challenges. You are free to contact the airline before your day of arrival for them to organize the necessary facilities like the wheelchair. This enables you easily access the airport on landing and move from one location to the other. If you need assistance, the airport also provides the same.

  • How long is the flight to Puerto Rico from Jacksonville?

    Flights to San Juan3h 18m
  • What is the cheapest flight to Puerto Rico from Jacksonville?

    The cheapest ticket to Puerto Rico from Jacksonville found in the last 72 hours was $59 one-way, and $117 round-trip. The most popular route is from Jacksonville to San Juan Luis Munoz Marin Intl, and the cheapest round-trip airline ticket found on this route in the last 72 hours was $59.

  • Which airlines fly to Puerto Rico?

    Frontier flies most frequently to San Juan Luis Munoz Marin Intl from Jacksonville.

  • How does KAYAK find such low prices on flights from Jacksonville to Puerto Rico?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights from Jacksonville to Puerto Rico.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket from Jacksonville to Puerto Rico?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight from Jacksonville to Puerto Rico is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights from Jacksonville to Puerto Rico?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly from Jacksonville to Puerto Rico with an airline and back with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight from Jacksonville to Puerto Rico?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying from Jacksonville to Puerto Rico up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

See more FAQs

Top tips for finding cheap flights to Puerto Rico

  • Book at least 1 week before departure in order to get a below-average price.
  • High season is considered to be January, November and December. The cheapest month to fly from Jacksonville is January.
  • Morning departure is around 31% more expensive than an evening flight, on average*.
  • Jacksonville Airport (JAX) offers the best facilities to lactating mothers. It has baby care facilities. A lactating suite is near the food court. You can breastfeed your baby without any interference. A comfortable chair is available. You can pump milk for your baby before leaving the airport.
  • JAX is the most suitable for corporate travelers. There is a business center located within the airport. The spacious room is available for you to rent. It has executive chairs, board-style tables, and a computer hook-up. There is internet that allows you to connect with other partners who are not within the airport. You can also have a teleconference showing your full video.
  • JAX has lounges. Airline lounges are available for members only and at Concourse A. Military lounges are also available for US military and their families. It is located at the main terminal on the first floor. It is free of charge. You can rest as you wait for the departure time of your flight.
  • San Juan Airport (SJU) in Puerto Rico has a restaurant where you can have a meal. It is located in the Luis Munoz Marin Airport terminals. Fast food is available for the arriving travelers who are in a hurry. There is a food store where you can get all your food. They are available at a pocket-friendly price to all arriving travelers.
  • Borinquen Airport (BQN) in Puerto Rico offers car rental services to arriving travelers. Several car rental companies are located within the airport. The companies include Avis, Hertz, Sixt, Thrifty, and Budget. You can book the car online to avoid inconvenience once you arrive at the airport. This saves you the stress of looking for a means of transport to reach your destination.
See more tips
*Average of the lowest prices shown in KAYAK’s search results for departures within the next 30 days

Top 5 airlines serving from Jacksonville to Puerto Rico

Need help choosing which airline to fly with from Jacksonville to Puerto Rico? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
8.0
DeltaOverall score based on 8456 reviews
8.5Crew
7.3Food
7.9Entertainment
8.2Boarding
8.0Comfort
Airline reviews

Flight left early and arrived early. the whole trip was excellent.

10.0 ExcellentNick, Jan 2025TPA - SEA
Read more Delta reviews

Flight left early and arrived early. the whole trip was excellent.

Newer plane, relatively easy boarding, not a full flight and was told that we could not be moved up because of weight and balance issues. Otherwise, a very good experience.

Everything was great. Great service, excellent communication, and early arrival

I sat in comfort plus. It was fine. Seats were comfortable. I got drinks and snacks.

Good and consistent Printer in lounge did not work for me :(

Great - This was the last flight before hurricane closures and did a quick turnaround to get the plane heading north. Much appreciated.

I liked the screens in the seat headrest with movies to watch. I didn’t like being forced to check my carryon bag and being told there wasn’t room for my bag - when there were 5 bins sitting empty on takeoff. I didn’t like the “I don’t give a fig” attitude of the flight attendants and the delta gate attendants when I asked why they decided to put me out. They gave me a 1800 number to call but I can’t get a live person on the phone. Customer service is non existent. My business must not be that important to them.

It was not in Delta's control, but when we landed, we ended up parking at the wrong gate, and so everyone was already ready to deplane and had their carryon bags, ready to leave. But we had to sit down and move to the proper gate. This process took over 30 minutes. Again, not Delta's fault - more so on the staff at JFK

It’s was good. There’s so much room for improvement though. Since the plane was small, there was no entertainment but for years now, the most jarring aspect of travel is the lack of tasty snacks.

Love delta but the delays and long waits for updates was just too much this time.

Except for the 28 minute delay leaving and the earlier reschedule to a later takeoff time the flight was good.

Loved the leg room and tvs screens on the seats and free WiFi. Wish the price was lower and could save by rebooking

The flight was delayed for 4 hours. Once onboard the crew was wonderful.

Very well organized both boarding and deplaning. Very satisfied with the service I received.

I rate it is good we had a 4-hour travel delay at one point but JetBlue gave out food vouchers and travel points credits for another flight so they try to make up for it

Flight was on time arrived at the destination 10min early they kept in touch via email

My encounter with the entertainment services provided on board was moderate; the functionality of the Wi-Fi connection was either sluggish or nonoperational, while the display screens were antiquated and suffered from poor visibility. On the positive side, the cabin exuded a sense of expansiveness, and the crew exhibited amiable and accommodating behavior throughout the journey.

They delayed our flight by 45 minutes and then re-updated the departure time back to normal schedule with no notification, email, or app update causing probably 40 people to miss the flight as they left without us.

terrible. Because I felt very unwell during the flight. How do they leave a woman alone in the middle of 2 men? an obese man who was falling on top of me.

The walk from baggage claim to the taxi is very difficult for older people I will never fly into JFK again. It is physically challenging

Food choices were very limited. Taste of the dishes was average.

I liked all the informational texts. I always knew where to go and when .

Liked the hospitality . The ight took us 6 hrs to get from fort myers to ewr.

Flight was delayed two hours. No snacks and no tv screens. My bag got stuck in Chicago

Awful. Worst airline I have ever been on. Crew were among the rudest people I have ever dealt with. United staff members were rude and disrespectful. My flight was delayed, causing me to miss a connecting flight. I understand things happen, but when staff start lying about what actually happened, that is when I have an issue. Just be honest, really it isn’t that hard. I’m being very honest with this review and I don’t find this difficult what so ever. In fact, because of United Airlines, my Christmas holiday was off to a really rocky start. As someone who has traveled across the world, it has only been United that I have had a truly awful experience.

Received an email the night before showing that there would be seatback entertainment on our flight. We get on and there was no seatback entertainment. And then it was a scramble to try to set up the iPads for the kids before takeoff so they could watch something for the four hour flight.

Boarding always seems a bit chaotic. Seat spacing could leave more for leg room.

The reason I don’t fly United. No in seat entertainment for a long flight and inconsistent WiFi and entertainment available from my device.

The bag drop personal were not helpful. There was no food on the flight. Boeing aircraft, lousy as always. Everything else was fine.

Asked several times dairy free options and was ignored. Was told chips was the only thing I could have that I should have put it on my profile “which it is”. Very unprofessional. WiFi didn’t work have the flight. Overall a very bad experience.

I never have a good experience with American and this was no different. The airplane was INCREDIBLY hot. Like unbearably so. Everyone was fanning themselves with pamphlets and sweating. When someone asked the flight attendant to turn down the temperature they were told there was nothing the crew could do. Once we pushed back from the gate we then had to wait an hour to take off and the communication from the crew was not good. People were getting up this whole time and a man was even in the bathroom when we took off. Once we landed at our destination we waited another 30 minutes at the gate to deplane with, again, no communication from the crew as to what was going on.

I had a horrible experience from the time I dropped off my bags until the time I landed. The staff taking the bags at the check-in counter prior to security, forced me to check my baby stroller, even though it weighed less than 20 pounds. their excuse was that the wheels were too big. I have never had an issue gate checking this exact same stroller in the past either on American or on any other airline. when I asked for the agent to show me the rule about the size of the wheels on strollers, they told me to look it up on the AA website. I did so, and did not find any indication that wheel size was a problem for gate checking strollers. The only limitation would be the weight of the stroller which mine was below. I was left with a one-year-old child and all of my carry-on luggage, diaper bag, and the like to walk around the airport without the assistance of a stroller and had the same issue when I exited the plane and had to go all the way to baggage claim without a stroller. In addition, while on the airplane, I was told I can only get one bag of cookies as a snack, even though I was with a child. Apparently my child and I were supposed to share a cookie. While this latter issue is a minor one, it is just another example of the absolutely horrible customer service that American Airlines provides. In addition, the 737 aircraft that I was on was extremely hot and the air vents above the seat were so far away from the aisle and middle seats that it was comical. I could barely reach the air vent to adjust it. I had to ask the person in the window seat to do it for me. The whole experience was just a nightmare.

Ok. Got us there safely and a bit early. Need food available on this long flight. Almost 3 hours.

Flight was delayed by 11 hours. Flight agent finally had to rebook us, but did not rebook fully correctly. We had to pay out of pocket to get to the hotel they booked us and couldn’t check in the next day online because the next day’s agent said they didn’t complete the process the night before.

Had to go get beer myself from attendants in the back of the aircraft

Flight was delayed multiple times and I chose to switch to another flight that had a layover. I finally arrived 7 hours later than I was supposed to.

Flight areas delayed 3 hours , train in the airport didn’t work

The flight was on time and everything went very smoothly.

I think I paid for an extra legroom seat and to be honest, there was not a lot of space available for my not very long legs. The flight was totally full and the staff did everything possible to meet the needs of all passengers. My only concern was for the size and spacing of my seat.

Typically, I am always impressed with American personnel. These you run into the rude old hags that are still around. I can tell over my 40 years of flying with them, they have made strides in improving their attitudes.

After waiting several minutes to be acknowledged by 3 employees on their phones, was told we had missed our flight because the doors were closed at that literal moment. Had they given any actual service or help while we were standing there we would have been on with time to spare. More than 10 people were turned away in this fashion claiming there was no way they could let us on the plane, even though it was still sitting connected to the terminal. After the desk agents let us know they didn't care about the situation we were forced to pay more than twice the price of our original tickets as no credits were given for the price of the "missed" flight. And the icing on the cake was after being treated poorly, fleeced for another few hundred dollars for new tickets? We waited on the next plane for 25 minutes passed the "doors closed" time, letting almost an extra dozen passengers on board. You're company has lazy, disinterested employees and your lack of any real help will ensure this was the first and last time we fly Frontier. Awful.

The seats were extremely hard and uncomfortable. It was disappointing even for a budget airline.

Charging $74 for one checked bag is outrageous. I will never fly Frontier again.

Frontier notifying me earlier of flight delay of over 2 hours.

One crew member was rude about our bags. Be nice about it. We don’t fly a lot. And the fact that you have to pay for a carry on is ridiculous

At check in they don’t let you be with the person you are traveling with unless you pay $40 per seat . Really bad policy they have

The trip was unremarkable which is good. Crew was very professional and courteous.

Online check-in was not user-friendly. Too many fees, not cost effective.

FRONTIER SUCKS! The agent downstairs tricked me into booking, just to get to the gate. At the gate, they told me they couldn't help. I then called Customer Service. They and the gate attendants kept blaming each other. Neither side was willing to help the customer.

Good for the price. My only complaint is that the pilot should keep the air flowing while passengers are waiting to getting out of airplane.

Book cheap flights from Jacksonville to Puerto Rico

Recent round-trip flight deals

2/24Mon
1 stopFrontier
11h 38mJAX-SJU
2/26Wed
1 stopFrontier
12h 13mSJU-JAX
$117
3/3Mon
1 stopFrontier
11h 48mJAX-SJU
3/5Wed
1 stopFrontier
12h 13mSJU-JAX
$120
4/9Wed
1 stopDelta
8h 05mJAX-SJU
4/23Wed
1 stopDelta
7h 39mSJU-JAX
$215
3/27Thu
1 stopDelta
7h 58mJAX-SJU
4/2Wed
1 stopDelta
8h 49mSJU-JAX
$258
4/9Wed
2 stopsAmerican Airlines
8h 05mJAX-SJU
4/23Wed
1 stopAmerican Airlines
12h 17mSJU-JAX
$286
2/13Thu
1 stopJetBlue
7h 40mJAX-SJU
2/17Mon
1 stopJetBlue
9h 51mSJU-JAX
$295
2/27Thu
1 stopAmerican Airlines
7h 51mJAX-SJU
3/4Tue
1 stopAmerican Airlines
10h 48mSJU-JAX
$308
3/1Sat
1 stopUnited Airlines
8h 19mJAX-SJU
3/4Tue
1 stopUnited Airlines
8h 56mSJU-JAX
$325
2/25Tue
1 stopJetBlue
9h 54mJAX-SJU
3/3Mon
1 stopJetBlue
9h 53mSJU-JAX
$338
2/24Mon
1 stopUnited Airlines
8h 36mJAX-SJU
2/25Tue
1 stopUnited Airlines
8h 56mSJU-JAX
$415

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Recent one-way flight deals

2/24Mon
1 stopFrontier
11h 38mJAX-SJU
$59
2/18Tue
1 stopFrontier
9h 30mJAX-SJU
$84
4/29Tue
1 stopDelta
6h 20mJAX-SJU
$108
4/1Tue
1 stopDelta
7h 58mJAX-SJU
$123
5/27Tue
1 stopAmerican Airlines
15h 20mJAX-SJU
$152
2/28Fri
1 stopJetBlue
9h 48mJAX-SJU
$161
3/31Mon
1 stopJetBlue
8h 31mJAX-SJU
$171
5/24Sat
1 stopAmerican Airlines
14h 51mJAX-SJU
$183
2/24Mon
3 stopsUnited Airlines
31h 36mJAX-SJU
$335
3/31Mon
2 stopsUnited Airlines
14h 37mJAX-SJU
$340

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Last minute flights from Jacksonville to Puerto Rico

Last minute flight, train and bus deals

2/4Tue
multi-stopSouthwest
11h 40mJAX-SJU
2/11Tue
multi-stopSouthwest
12h 10mSJU-JAX
$308
2/4Tue
multi-stopSouthwest
11h 40mJAX-SJU
2/11Tue
multi-stopSouthwest
12h 10mSJU-JAX
$356
2/3Mon
multi-stop
22h 53mJAX-SJU
2/8Sat
multi-stop
22h 36mSJU-JAX
$391
2/3Mon
multi-stopDelta
6h 15mJAX-SJU
2/8Sat
multi-stopDelta
8h 27mSJU-JAX
$407
2/3Mon
multi-stop
20h 20mJAX-SJU
2/16Sun
multi-stop
38h 54mSJU-JAX
$480
2/3Mon
multi-stopAmerican Airlines
8h 47mJAX-SJU
2/16Sun
multi-stopAmerican Airlines
6h 24mSJU-JAX
$489
2/2Sun
multi-stopAmerican Airlines
7h 36mJAX-SJU
2/9Sun
multi-stopAmerican Airlines
9h 11mSJU-JAX
$525
2/4Tue
multi-stopUnited Airlines
8h 36mJAX-SJU
2/10Mon
multi-stopUnited Airlines
9h 11mSJU-JAX
$530
2/2Sun
multi-stopDelta
8h 01mJAX-SJU
2/4Tue
multi-stopDelta
5h 56mSJU-JAX
$555
2/4Tue
multi-stopUnited Airlines
9h 46mJAX-SJU
2/10Mon
multi-stopUnited Airlines
9h 11mSJU-JAX
$606

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Everything you need to know for your flight from Jacksonville to Puerto Rico

Information on your arrival and departure airports

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