$55 Find Cheap Flights from Houston to Puerto Rico

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight from Houston to Puerto Rico departing on 5/6. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
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Best Puerto Rico Flight Deals from Houston

Cheapest round-trip prices found by our users on KAYAK in the last 72 hours

Aguadilla
Aguadilla1 stop$309
Ponce
Ponce1 stop$319
Culebra
Culebra2 stops$506

Cheap Flight Deals from Houston to Puerto Rico (IAH-PR0)

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for round-trip flights from Houston to Puerto Rico that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.

Recent round-trip flight deals from Houston to Puerto Rico

Recommended round-trip deals departing in the coming months from the most popular airlines that fly from Houston to Puerto Rico.
Discover the best prices for you by selecting your travel dates on KAYAK.
Choose your dates
United Airlines Logo
12:00 pm - 11:54 pmIAH-SJU
10h 54m1 stop
United Airlines Logo
3:56 pm - 12:51 amSJU-IAH
9h 55m1 stop
$145United Airlines
Find Deal
Sat, May 3 - Fri, May 9
Spirit Airlines Logo
2:10 pm - 7:40 pmIAH-SJU
4h 30mnonstop
Spirit Airlines Logo
8:45 pm - 12:45 amSJU-IAH
5h 00mnonstop
$160Spirit Airlines
Find Deal
Sat, May 3 - Tue, May 6
United Airlines Logo
3:02 pm - 8:38 pmIAH-SJU
4h 36mnonstop
United Airlines Logo
3:56 pm - 12:51 amSJU-IAH
9h 55m1 stop
$161United Airlines
Find Deal
Sat, May 3 - Fri, May 9
Spirit Airlines Logo
2:10 pm - 7:40 pmIAH-SJU
4h 30mnonstop
Spirit Airlines Logo
8:12 pm - 7:53 amSJU-IAH
12h 41m1 stop
$162Spirit Airlines
Find Deal
Sat, May 3 - Fri, May 9
Spirit Airlines Logo
2:10 pm - 7:40 pmIAH-SJU
4h 30mnonstop
Spirit Airlines Logo
8:12 pm - 7:53 amSJU-IAH
12h 41m1 stop
$164Spirit Airlines
Find Deal
Tue, May 6 - Fri, May 9
Spirit Airlines Logo
7:26 pm - 9:43 amIAH-SJU
13h 17m1 stop
Spirit Airlines Logo
11:50 am - 3:50 pmSJU-IAH
5h 00mnonstop
$169Spirit Airlines
Find Deal
Mon, May 19 - Thu, May 22
Spirit Airlines Logo
9:40 am - 11:46 pmIAH-SJU
13h 06m1 stop
Spirit Airlines Logo
11:50 am - 3:50 pmSJU-IAH
5h 00mnonstop
$186Spirit Airlines
Find Deal
Mon, May 5 - Thu, May 8
American Airlines Logo
7:37 pm - 5:12 amIAH-SJU
8h 35m1 stop
American Airlines Logo
3:07 pm - 10:44 pmSJU-IAH
8h 37m1 stop
$270American Airlines
Find Deal
Sat, May 10 - Tue, May 13
Frontier Logo
9:05 pm - 8:36 amIAH-SJU
10h 31m1 stop
Frontier Logo
3:56 am - 4:03 pmSJU-IAH
13h 07m1 stop
$298Frontier
Find Deal
Sat, May 17 - Sun, May 18
Frontier Logo
9:05 pm - 1:57 amIAH-BQN
27h 52m1 stop
Frontier Logo
2:47 am - 4:03 pmBQN-IAH
14h 16m1 stop
$309Frontier
Find Deal
Fri, May 9 - Sun, May 18

KAYAK's insights & trends for Houston to Puerto Rico flights

Get data-powered insights and trends into flights from Houston to Puerto Rico to help you find the cheapest flights, the best time to fly and much more.

What is the cheapest Houston George Bush Intcntl Airport to Puerto Rico flight route?

The cheapest price for flight routes found by users searching on KAYAK in the last 2 weeks for round-trip flights from Houston George Bush Intcntl Airport to Puerto Rico.
The cheapest ticket to Puerto Rico from Houston George Bush Intcntl Airport found in the last 72 hours was to San Juan, at $121 round-trip. The most popular route is from Houston George Bush Intcntl Airport (IAH) to San Juan Luis Munoz Marin Intl Airport (SJU), and the cheapest round-trip airline ticket found on this route in the last 72 hours was $121.

What is the cheapest time of day to fly to Puerto Rico?

The average price for all round-trip flights from Houston George Bush Intcntl Airport to Puerto Rico depending on the time of departure, clicked by users on KAYAK in the last 2 weeks.
The cheapest time of day to fly to Puerto Rico is generally in the afternoon, when round-trip flights cost $260 on average. Morning departures are around 5% cheaper than evening flights, on average. The most expensive time of day to fly to Puerto Rico is generally at night, which is peak travel time and where the average cost of a ticket is $552.

What is the cheapest month to fly from Houston George Bush Intcntl Airport to Puerto Rico?

To calculate monthly average prices, KAYAK takes all prices for each month over the last year for round-trip flights from Houston George Bush Intcntl Airport to Puerto Rico, removes the top 0.1% to account for outliers, and then takes the median of all values for each month.
The cheapest month for flights from Houston George Bush Intcntl Airport to Puerto Rico is September, when tickets cost $233 (return) on average. On the other hand, the most expensive months are December and June, when the average cost of round-trip tickets is $537 and $438 respectively.

What’s the cheapest day of the week to fly from Houston to Puerto Rico?

The average price of all round-trip flights from Houston George Bush Intcntl Airport to Puerto Rico clicked on KAYAK for each day over the last 12 months.
When flying from Houston to Puerto Rico, you should consider leaving on a Monday and avoid Thursdays if you are looking for the best rates. For your return to Houston, you’ll find the best rates on Fridays and the most expensive ones on Sundays.

How far in advance should I book a flight from Houston George Bush Intcntl Airport to Puerto Rico?

To calculate weekly average prices, KAYAK takes all prices for each week before departure over the last year for round-trip flights from Houston George Bush Intcntl Airport to Puerto Rico, removes the top 0.1% to account for outliers, and then takes the average of all the values for each week.
To get a below average price on the flight from Houston George Bush Intcntl Airport to Puerto Rico, you should book around 2 weeks before departure. For the absolute cheapest price, our data suggests you should book 4 weeks before departure.

Good to know

Low season

April

High season

December

Cheapest flight

$55
Best time to beat the crowds with an average 2% drop in price.
Most popular time to fly with an average 55% increase in price.
Flight from Houston George Bush Airport to San Juan

FAQs - booking Puerto Rico flights

  • Which airlines fly nonstop to Puerto Rico from Houston?

    You can book nonstop flights to Puerto Rico from Houston with only one airline, United Airlines. Other airlines, such as Frontier Airlines and Spirit Airlines, offer one-stop flights to Puerto Rico with a layover at Orlando (MCO), Philadelphia (PHL), or Tampa (TPA). United Airlines offers several daily direct flights from IAH to SJU. Flights to other airports in Puerto Rico include at least one stopover en route and take about 4h15min.

  • How do I get to George Bush Intercontinental Airport for my flight to Puerto Rico?

    You can use public transport to get to the airport from the city center without worrying about parking and traffic. The Metro bus is a popular means to the airport from the city center because it is affordable. BUSH IAH Express 102, which runs every 15 to 30 minutes, is a direct bus that takes you straight to Terminal C of IAH in about an hour. You can also use a taxi or rideshare like Uber, which is much faster.

  • What can I do during a layover at San Juan Airport?

    Thanks to the handful of amenities at the airport, you’ll find plenty to keep you busy at SJU. Take a breather while enjoying snacks and drinks at the lounges in Terminals A and C. Terminals C and D also have chapels where you can pray. The airport has more than 30 restaurants where you can enjoy a meal during your layover. Duty-free stores and souvenir kiosks are also available if you want to do some shopping.

  • Is there public transportation from San Juan Airport to the city center?

    Yes, public transport is available from San Juan Airport to the city center. San Juan city center is about 13 miles away, and the bus is the only reliable public transportation. Buses D53 and T5 run approximately every 30 minutes every day of the week. They take you from either Terminal A or B of the airport to the Terminal Covadonga in the city center. A one-way bus ticket from the airport to the city center will cost you about $0.75, making the bus the most affordable method of transportation. Large luggage is not allowed onboard these buses.

  • How does KAYAK find such low prices on flights from Houston to Puerto Rico?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights from Houston to Puerto Rico.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket from Houston to Puerto Rico?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight from Houston to Puerto Rico is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights from Houston to Puerto Rico?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly from Houston to Puerto Rico with an airline and back with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight from Houston to Puerto Rico?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying from Houston to Puerto Rico up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

See more FAQs

Top tips for finding cheap flights to Puerto Rico

  • George Bush Intercontinental Airport (IAH) serves flights to Puerto Rico from Houston. Terminal C handles direct and non-direct airlines flying to Puerto Rico from IAH.
  • If you’re not a fan of eating during a flight, IAH terminals have a variety of fast food and restaurant options where you can eat before you board your flight.
  • San Juan Airport (SJU) in Puerto Rico serves cities like San Juan, Toa Baja, Vega Alta and Trujillo Alto. Meanwhile, cities like Aguadilla, Aguada, Moca, Isabela, and Rincon are served by Aguadilla Airport (BQN).
  • Travelers should be aware that they will undergo a biometric facial comparison process when they arrive in Puerto Rico. The law requires all airports in Puerto Rico to verify the identity of every traveler.
  • US citizens only need to present valid ID to enter Puerto Rico. A passport or visa is not necessary because Puerto Rico is a territory of the US.
See more tips

Top 5 airlines serving from Houston to Puerto Rico

Need help choosing which airline to fly with from Houston to Puerto Rico? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
8.0
DeltaOverall score based on 7920 reviews
8.2Boarding
7.9Comfort
8.5Crew
7.9Entertainment
7.3Food
Airline reviews

This had nothing to do with Delta… The flights were on time and flawless. The service was excellent. We purchased seats in (aisle/middle) comfort plus since this was a cross country flight. Unfortunately, the woman seated at the window was 300+ pounds and, as might be expected, covered up about a third of the middle seat also. there was absolutely nothing that Delta could have done about that… I just don’t know what the answer should be. If you purchase a seat, you should should be able to use the entire seat and not just the portion that someone else is not sitting/oozing in. Disappointing…there should be something that could be done….I'm just not sure what solution could be.

10.0 ExcellentGary, Apr 2025TPA - LAX
Read more Delta reviews

This had nothing to do with Delta… The flights were on time and flawless. The service was excellent. We purchased seats in (aisle/middle) comfort plus since this was a cross country flight. Unfortunately, the woman seated at the window was 300+ pounds and, as might be expected, covered up about a third of the middle seat also. there was absolutely nothing that Delta could have done about that… I just don’t know what the answer should be. If you purchase a seat, you should should be able to use the entire seat and not just the portion that someone else is not sitting/oozing in. Disappointing…there should be something that could be done….I'm just not sure what solution could be.

Delayed take-off. Very small plane so very scary with lots of bumps during the flight. Would never fly Delta on short flights in small 80 seaters plane again! Felt relieved when landed.

The worst part was I was NOT allowed in the lounge even though I was holding a first class ticket and have a premium American Express card. I have flown Business or First Class with many airlines. Delta is the ONLY one who does not extend this courtesy to anyone except people who hold the very expensive American Express card. As a result, I won’t fly Delta if I have any other choice.

It was an overnight flight and I desperately needed coffee before we landed, but Delta does only one beverage service, and that is shortly after takeoff, not before landing at 5 am.

A little bumpy ride . No food was being provided due the the turbulence. That was ok it was a short flight to my standards.

Simply outstanding. Their new lounge for Delta One customers is a cut above the rest.

The Dekta Rep that checked us in was great. She's very personable, pleasant, and can tell she enjoys her job.

After a 5 hour delay waiting at the gate (3 delays adding up) with no clear reason provided, we finally boarded flew 3/4 of the way to Toronto then were turned back to New York. As we neared New York, the pilot declared that it was his fault, something to do with timing and him not being allowed into the country???? How could the airline let his happen? They had hours to prepare and make sure they had a crew available for the flight! We ended up in Toronto a day late with no sleep.

The plane was old with small storage areas that had problems closing/latching and not enough storage for everyone, and worn, damaged seats. Service was great but feel a little unsafe on such well used planes.

Terrible and im avoiding them in the future. My initial flight was delayed causing me to rebook my flight and when speaking with the representative to rebook I explained this is the second time my flights were delayed and they did nothing to help me. I wasn't booked to comfort plus or given a voucher or anything. I was almost late for my meeting that I needed to attend on Monday because of the games delta played delaying my flights even more and putting me in the very back of the plane next to an extremely intoxicated passenger

Smooth flight. Boarding was chaotic. Could not hear the gate agent over the intercom. People were lined up in the wrong lines. Groups one and two were told to board through line one and group 3 through line 2. All very confusing. Once in the air, the flight was smooth. There was no entertainment option on this aircraft, even though it was a larger aircraft.

My suitcase was completed destroyed. The top part is broken and unusable now.

We boarded but then sat there waiting on some missed connection people to get on so we sat for about 15 minutes for that. Then we sat again because the passenger manifest was wrong and they had to figure it out before we could leave. That took about another 20 minutes or so. The crew was working hard to figure it out so it’s not their fault. It ended up being a system glitch where someone was upgraded to first class while another person was also in the same seat and it just created a mess that took a little while to figure out. They literally went to every person on the plane asking their names to see who was sitting in the wrong seat. I also hate the entertainment that must be watched on your phone or tablet. Just give us setback screens. It’s so much better. Almost every Delta flight has this now and it is so nice to have them. The crew did a great job. I have no complaints from them. They were very hard working, even with the mishap and a disgruntled passenger.

My priority checked bag was not loaded on the flight. I had to sit in baggage claim in Las Vegas for 2 1/2 hours waiting for the next flight. All baggage staff were very helpful, tracking showed it as scanned for loading. Nobody told me why it wasn't on my flight.

All male crew was just too woke for me. I felt like a sardine. I will never take a window seat or the rearmost seat again. I booked early and did not pay for seat selection and that was a mistake. The security at IAH was atrocious. I was violated and radiated as I was in a hurry to connect to my other flight. I may have lost items under the seat in front of me that I couldn't see nor bend over to look.

It’s been awhile since I have traveled on United. I, along with my family who were on the flight noted how smoothly everything went . Boarding, flight crew and service was excellent.

In general ok, my only issue is that they had no hot items for purchase. I had very little time in my connection due to baggage/customs/TSA, thag I barely even had a chance for a stop at the washroom and buy water, to make it to my gate when they started boarding. I had nothing to eat because the trip started early, so I was ready to purchase, and they had nothing except for dry items like snacks. I had to purchase a mediocre, overpriced cheese and fruit board, instead of at least a pizza or sliders that I was planning on getting. Other than that, it was fine. But that’s typical Air Canada, to not have enough.

How badly can you screw up baggage claim? We were told to go to baggage claim too for our bags from this flight. Another flights bags were there. They finished up. More bags from a different flight arrived. Our bags did not Finally the baggage claim belt stopped working and and are flight was still listed on the arrivals for that baggage claim 2. And then nothing It turns out that they had been delivered not only the United baggage claim but far away on a Delta baggage claim No I never told us. It was only the people looking around who had been on the flight But I’m sure there was plenty of time for the employees to raffle through the bags and steal whatever they wanted

Long wait before take off without an update for 20 minutes. Flight was good otherwise.

Flight delayed over 2 hours . I was flying bussiness never got food cause they ran out of what i wanted

Took off on time and successfully avoided weather that looked to be a problem along the way

I liked everything. Except that my neck was hurting on the seat. I couldn't sleep.

We were delayed Al ost / hours after boarding so that maintenance had to add oil to the engines. Then the oil they grabbed had been left out in the Dallas record cold and was frozen. They had to go back to the hanger and grab some that was not frozen.

They changed my seat from one that I had paid for as an upgrade to a regular seat at the last minute.

Flight was empty so had a whole row to myself. Still had to wait to get the bag due to the negligence at Palm Springs departure.

Everything was on time, we arrived early, everything worked well.

Angela was the best fa ever. She made that 8 hour flight a breeze

This was a pleasant, short flight and the crew was friendly.

The service and food needs to improve to catch up with other international flights

Small plane, so no entertainment. Hour delay! Nobody explained wht the delay was all about.

It’s what we expected from Spirit..reasonable cost, good for a 2-3 hour flight. Disappointed that we had a 2 hour delay in departure from DFW for a maintenance issue, but the pilot handled it well once we were outbound on a different Airbus.

The flight was on time. The seats are very narrow.

Unclear pricing; ended up being charged an extra $52 just to get onboard

Seats are poor. They do not lean back. They do not even have pockets on the back, making it impossible to store a phone or a coke bottle. If you opt for basic economy cheap seats, they stick you always in the middle or window seat, even though there are unoccupied seats on the aisle. And then there is the nickel and diming. No carry-ons. And checking your carry-on is $70. At the end there is no price advantage but there is plenty of aggravation.

Flight crew was great. Spirit leaves a lot to be desired in terms of comfort.

Worst Airplane ride I ever have taken... My purchased seat was changed without my consent

would be great to get basic water, soda at least and stop charging for carry ons

They changed our departure time 6 times before I even reached the airport. Delayed, Ontime, Delayed Back on time, Then Delayed. We finally boarded the plane and then we had to sit on the runway for over an hour only to be told they were taking us back to the gate for an additional 2 hour delay. Lack of communication and a complete waste of time! Never again!

Very difficult. Flew out on Dec 24th and it was a mess. They know it is going to be the busiest time of the year and they had no organization. Finally they called for people going on certiam flights so they could get them thru thw line then we had to rush to our gate to get in li e to board.We missed our flight do to being stuck at the border of Mexico. They would not work with us to make an affordable price so we had to wait a day with no where to go and pay 280 more for our flights. I would think that a complimentary drink would be nice. But we had to pay 4.49 for a coke. Not an overall good experience

I couldn't understand the crew when they announced it was a new plane and there was therefore no wifi, huh? Seriously lame for 2025!

Not very good. Paid in excess of $400 for assigned seating for my family and that was not provided. I want that money back.

The seats were hard molded plastic covered in plastic vinyl. And the scam to charge people extra to sit together. Don’t they know we can just ask someone to trade seats. And watching the staff separate young children from parents… super classy. We had to guilt them into offering up our seats. This companies policies suck. Don’t give them your money.

The seats were awful, hard plastic covered in sheet vinyl. The airline tries to scam you into paying extra to get seat together when the flight wasn’t full. They were going to separate a family with young children but my wife who had a row to herself gave up her seat so the young mom could be with her young boys. I’m never giving this airline my money again.

It was a short flight so no food or entertainment….

Seats are uncomfortable but price is good. Guess I can put up with misery for four hours.

I’ve never traveled on Frontier before. If you want basic, no frills, friendly service at great prices then give them a fly!

Cancelled and declined to find alternatives Earlier flight is 2 days later Sent the cancellation notification very late, wish I knew earlier would have stayed to watch the Miami open final game Very disappointing service

The worst flight of my life. Never will I fly frontier again

Landing in terminal 2, but my luggage is terminal 3. We (and others) were looking for it in terminal 1. We probably missed the crew broadcast, but the communication could have been clearer for non native (or elderly) passengers.

I chose the seats when booked the flight and paid for them. However after checking in I found we were assigned different seats!

Everything you need to know for your flight from Houston to Puerto Rico

Information on your arrival and departure airports

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